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ChangeLog
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2025-04-04 Dirk Eddelbuettel <[email protected]>
* .github/workflows/ci.yaml: Switch to r-ci with included bootstrap
2024-08-23 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.4.0.2
* inst/NEWS.Rd: Release 0.3.4.0.2
* DESCRIPTION (Authors@R): Correct two ORCID tag typos
2024-08-14 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.4.0.1
* inst/NEWS.Rd: Release 0.3.4.0.1
2024-08-13 Dirk Eddelbuettel <[email protected]>
* inst/include/Eigen/src/misc/blas.h: Conditionally comment out
xerbla which is now also provided by r-devel (CRAN request)
2024-08-12 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Authors@R): Added, with ORCID IDs
2024-05-16 Dirk Eddelbuettel <[email protected]>
* README.md: Use tinyverse.netlify.app for dependency badge
2024-03-01 Dirk Eddelbuettel <[email protected]>
* .github/workflows/ci.yaml (jobs): Update to actions/checkout@v4,
add r-ci-setup actions
2024-02-28 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.4.0.0
2024-02-12 Tomas Kalibera <[email protected]>
* inst/include/unsupported/Eigen/CXX11/src/ThreadPool/ThreadYield.h:
Support clang on Windows by including 'sched.h' header
2024-01-17 Yixuan Qiu <[email protected]>
* DESCRIPTION (Version, Date): Release candidate 0.3.3.99.0
* inst/include/Eigen: Upgraded to Eigen 3.4.0
* inst/include/unsupported/Eigen: Idem
* patches/eigen-3.4.0.diff: Carried local CRAN patches forward
* patches/howToDiff.md: Idem
2023-11-01 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.4
* inst/NEWS.Rd: Release 0.3.3.9.4
2023-10-05 Mikael Jagan <[email protected]>
* DESCRIPTION: Package 'Matrix' is now only a Suggests:
* NAMESPACE: Remove unconditional imports from package Matrix
* inst/include/Eigen/CholmodSupport: No longer need to include
RcppEigenCholmod.h
* inst/include/Eigen/src/CholmodSupport/CholmodSupport.h: Small
wrapper adjustments conditional on Matrix use
* inst/include/RcppEigenCholmod.h: Updated
* inst/include/RcppEigenForward.h: Simplified
* inst/include/RcppEigenWrap.h: Ditto
* inst/include/RcppEigenStubs.cpp: New shorter helper
* inst/include/RcppEigenStubs.h: Removed
2023-07-21 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Date, Version): Roll micro version and date
* README.md: Add r-universe badge
2023-07-20 Dirk Eddelbuettel <[email protected]>
* src/RcppEigen.cpp (EigenNbThreads): Add simple threads reporter
* R/fastLm.R (fastLmPure): Simpler call to `fastLm_Impl()`
* src/init.c: Replaced by auto-generated section in RcppExports.cpp
* src/RcppExports.cpp: Regenerated
* R/RcppExports.R: Idem
* src/Makevars: Document possible use of '-fopenmp'
* src/Makevars.win: Idem
2023-04-18 Dirk Eddelbuettel <[email protected]>
* README.md: Use app.codecov.io as base for codecov link
2023-03-10 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Date, Version): Roll minor version
* R/RcppEigen.package.skeleton.R: No longer set Imports: RcppEigen in
DESCRIPTION and NAMESPACE
2023-02-12 Dirk Eddelbuettel <[email protected]>
* inst/CITATION: Convert to bibentry() style with person()
2022-11-04 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.3
* inst/NEWS.Rd: Release 0.3.3.9.3
* src/init.c: Add 'void' for proper prototype pleasing clang-15
* R/fastLm.R (summary.fastLm,print.fastLm): Refer to correct and full
variable name df.residual in the returned object
* .github/workflows/ci.yaml (jobs): Update to actions/checkout@v3
2022-09-15 Jonah Gabry <[email protected]>
* inst/skeleton/rcppeigen_hello_world.cpp: Correct typo
2022-04-08 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Depends): Add a versioned dependency on R 3.6.0 or
later because of our use of FCONE to support USE_FC_LEN_T
2022-04-05 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.2
* inst/NEWS.Rd: Release 0.3.3.9.2
2022-04-04 Dirk Eddelbuettel <[email protected]>
* src/fastLm.cpp: Add FCONE in two calls for improved Fortran and C
character interface per Writing R Extensions, Section 6.6.1
2022-01-16 Dirk Eddelbuettel <[email protected]>
* inst/tinytest/test_wrap.R: Added (optional) large memory wrap tests
* inst/tinytest/cpp/wrap.cpp: Added C++ part of test
* .codecov.yml: Added to not trigger PR fail for small additions
2022-01-16 Mikael Jagan <[email protected]>
* inst/include/RcppEigenWrap.h: Refine use plain dense wrap() change
2022-01-15 Mikael Jagan <[email protected]>
* inst/include/RcppEigenWrap.h: Use R_xlen_t for vectors rows + cols
2021-12-29 Dirk Eddelbuettel <[email protected]>
* README.md: Add total downloads badge
2021-12-08 Dirk Eddelbuettel <[email protected]>
* README.md: Remove unused continuous integration artifact and badge
2021-10-13 Dirk Eddelbuettel <[email protected]>
* inst/CITATION: Refinment of doi use
2021-10-10 Dirk Eddelbuettel <[email protected]>
* inst/CITATION: Switch JSS url to doi form per JSS request
* README.md: Idem
2021-07-19 Dirk Eddelbuettel <[email protected]>
* inst/include/RcppEigenWrap.h: Two more #nocov tags
* src/fastLm.cpp: One more #nocov tag
2021-07-18 Dirk Eddelbuettel <[email protected]>
* inst/tinytest/test_fastLm.R: Add tests for summary
* src/fastLm.cpp: Add a few #nocov tags
2021-07-17 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Date, Version): Roll minor version
* R/RcppEigen.package.skeleton.R (RcppEigen.package.skeleton): Also
import RcppEigen in DESCRIPTION
2021-06-07 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Date, Version): Roll minor version
* inst/tinytest/test_misc.R: New test file
* inst/tinytest/test_fastLm.R: Added tests
* R/fastLm.R: Add single one-line nocov tag
* .Rbuildignore: Add .covignore and .codecov.yml
2021-06-06 Dirk Eddelbuettel <[email protected]>
* README.md: Added coverage badge
* .github/workflows/ci.yaml (jobs): Turn on coverage
* .covrignore: Added
* .codecov.yml (ignore): Idem
* R/RcppEigen.package.skeleton.R: Set nocov
2021-05-09 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (URL): Add GitHub repo to URL field
2021-01-02 Dirk Eddelbuettel <[email protected]>
* R/RcppEigen.package.skeleton.R: Wrap any() around grepl()
2020-12-25 Dirk Eddelbuettel <[email protected]>
* .github/workflows/ci.yaml: Small tweaks to CI YAML file
2020-12-17 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.1 (following
coordinated update of reverse dependency StanHeaders)
* inst/NEWS.Rd: Release 0.3.3.9.1
2020-12-14 Dirk Eddelbuettel <[email protected]>
* .github/workflows/ci.yaml: Add CI runner using r-ci
* README.md: Add new badge
2020-12-05 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.3.9.0
* inst/include/Eigen: Upgraded to Eigen 3.3.9
* inst/include/unsupported/Eigen: Idem
* patches/eigen-3.3.9.diff: Carried local CRAN patches forward
* .travis.yml: Switch to r-ci using focal and bspm
* README.md: Updated URLs to https and/or redirect location
* inst/CITATION: Idem
* man/RcppEigen-package.Rd: Idem
* man/fastLm.Rd: Idem
2020-08-16 Dirk Eddelbuettel <[email protected]>
* README.md: Add JSS badge
2020-03-29 Dirk Eddelbuettel <[email protected]>
* README.md: Added commit badge, edited
2020-01-22 Dirk Eddelbuettel <[email protected]>
* README.md: README.md: Add a Debian badge
2019-11-16 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.3.7.0
* inst/include/Eigen: Upgraded to Eigen 3.3.7
* inst/include/unsupported/Eigen: Idem
* patches/eigen-3.3.7.diff: Carried local CRAN patches forward
2019-11-01 Dirk Eddelbuettel <[email protected]>
* R/unit.test.R (compile_unit_tests): Removed as no longer needed
2019-10-31 Dirk Eddelbuettel <[email protected]>
* inst/tinytest/test_transform.R: Switch from RUnit to tinytest
* inst/tinytest/test_wrap.R: Idem
* inst/tinytest/cpp/transform.cpp: Added using Rcpp Attributes
* inst/tinytest/cpp/wrap.cpp: Idem
* inst/tinytest/cpp/sparse.cpp: More idiomatic Eigen code
* inst/tinytest/test_sparse.R: Idem
* .editorconfig: Added
2019-10-30 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Suggests): Switch from RUnit to tinytest
* .travis.yml (install): Ditto
* tests/tinytest.R: Converted to tinytest
* test_sparse.R: Converted to tinytest
* cpp/sparse.cpp: Added using Rcpp Attributes
2019-10-29 Dirk Eddelbuettel <[email protected]>
* test_fastLm.R: Converted to tinytest
* test_RcppEigen.R: Idem
* test_solution.R: Idem
* cpp/rcppeigen.cpp: Added using Rcpp Attributes
* cpp/solution.cpp: Idem
2019-10-28 Dirk Eddelbuettel <[email protected]>
* tests/tinytest.R: Renamed from tests/doRUnit.R
* inst/tinytest/test_fastLm.R: Renamed from inst/unitTests/runit*
* inst/tinytest/test_RcppEigen.R: Idem
* inst/tinytest/test_solution.R: Idem
* inst/tinytest/test_sparse.R: Idem
* inst/tinytest/test_transform.R: Idem
* inst/tinytest/test_wrap.R: Idem
2019-10-13 Dirk Eddelbuettel <[email protected]>
* README.md: Added CRAN + BioConductor badges for reverse depends,
add StackOverflow badge to recommend help searches under 'Rcpp'
* DESCRIPTION (Version, Date): Roll minor version
* R/RcppEigen.package.skeleton.R (RcppEigen.package.skeleton): Test for
example_code outside of haveKitten test; remove force argument if unused
2019-05-24 Dirk Eddelbuettel <[email protected]>
* vignettes/RcppEigen-Introduction.Rnw: Update vignette to use
RcppEigen:::eigen_version() instead of .Call()
2019-03-29 Dirk Eddelbuettel <[email protected]>
* inst/skeleton/rcppeigen_hello_world.cpp: Rework first example to
not rely on Eigen RNG which R CMD check would complain about.
2019-02-16 James Joseph Balamuta <[email protected]>
* R/runit.RcppEigen.R: Removed listing RcppEigen in Imports during
skeleton package creation.
2018-11-24 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.3.5.0
2018-11-23 Dirk Eddelbuettel <[email protected]>
* inst/include/Eigen: Updated to release 3.3.5
* inst/include/unsupported: Idem
* patches/eigen-3.3.5.diff: Diff of local patches
2018-09-02 Dirk Eddelbuettel <[email protected]>
* .travis.yml: Switch Travis CI to R 3.5 repo
2018-05-30 Michael Weylandt <[email protected]>
* inst/examples/lmBenchmark.R: Update benchmark script to use
microbenchmark and to use exposed fastLm functions from Rcpp
packages rather than invoking .Call directly
2018-05-25 Ralf Stubner <[email protected]>
* inst/include/RcppEigenWrap.h: Use Rf_xlength and R_xlen_t to
support long vectors
2018-02-07 Dirk Eddelbuettel <[email protected]>
* patches/eigen-3.3.4.diff: Diff to upstream Eigen 3.3.4,
cherry-picked in the 3.3.4 branch of Yixuan
2018-02-05 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.3.4.0
* inst/include/Eigen/src/Core/arch/CUDA/Half.h (Eigen): Condition use
of long long and unsigned long on C++11
* inst/include/Eigen/src/Core/arch/SSE/Complex.h (Eigen): Comment-out
use of diagnostic-suppressing pragma for gcc + clang to satisfy CRAN
* inst/include/Eigen/src/Core/util/DisableStupidWarnings.h: Idem
2018-02-04 Yixuan Qiu <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to the upstream 3.3 branch of Eigen
based on version 3.3.4
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/include/Eigen/src/Core/util/DisableStupidWarnings.h:
Patch from upstream Eigen that has not been ported to the 3.3 branch
(cf GitHub issue #48)
2017-11-19 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.3.3.1
* R/inline.R: Use '::' not ':::' for Rcpp.plugin.maker
2017-08-26 Dirk Eddelbuettel <[email protected]>
* .travis.yml (before_install): Use https for curl fetch
2017-06-06 Yu Gong <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h:
Also permit compilation under Haiku-OS
2017-05-28 Dirk Eddelbuettel <[email protected]>
* inst/examples/lmBenchmark.R (do_bench): Remove spurious argument in
call to RcppEigen:::Eigen_SSE() (cf github issue #44)
2017-04-29 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Release 0.3.3.3.0
[ which again owes a very big thank you to Yixuan for doing the work! ]
2017-04-27 Dirk Eddelbuettel <[email protected]>
* .travis.yml: Switch to using run.sh for Travis CI
2017-04-27 Yixuan Qiu <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen/src/Core/arch/CUDA/Half.h: Fixed compiler warning
on 'long long' type in C++ 98 mode
2017-03-14 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version, Date): Release 0.3.2.9.1
* src/init.c (R_init_RcppEigen): Call R_registerRoutines()
and R_useDynamicSymbols()
* NAMESPACE: Use .registration=TRUE on useDynLib
* R/fastLm.R (fastLmPure): Remove erroneous fourth argument from .Call
2017-03-13 Martin Maechler <[email protected]>
* inst/include/RcppEigenCholmod.h: Synchronize with Matrix package
2017-02-21 Yixuan Qiu <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.3 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
2017-01-20 Yixuan Qiu <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.2 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/unitTests/runit.RcppEigen.R, inst/unitTests/runit.sparse.R:
Explicitly convert matrix size to `double` type such that Rcpp can
properly return the value to R, thanks to ChingChuan and Dirk
2017-01-20 ChingChuan Chen <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.1 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* inst/examples/lmBenchmark.R: Fixed function names
2016-12-22 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (URL, BugReports): Added / updated
2016-11-12 Yixuan Qiu <[email protected]>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.0 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/include/RcppEigenForward.h, inst/include/RcppEigenWrap.h:
Added exporters for the new Map<SparseMatrix<T> > type
* inst/unitTests/runit.sparse.R: Unit tests for the new type
2016-08-20 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Release 0.3.2.9.0 with big thanks to Yixuan for doing
the work!
2016-08-19 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.9 of Eigen
* README.md: Updated version number and fixed the NOTE from CRAN URL
check
2016-04-30 Dirk Eddelbuettel <[email protected]>
* README.md: Expanded
2016-04-28 James Joseph Balamuta <[email protected]>
* inst/include/RcppEigenWrap.h: Added an exporter class for
Map::RowVectorX<t> per http://stackoverflow.com/questions/36920689/
* inst/include/unitTests/runit.RcppEigen.R: Added row exporter unit
test.
2016-02-29 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version): Release 0.3.2.8.1
* inst/NEWS.Rd: Release 0.3.2.8.1
* debian/*: Changes for Debian release of 0.3.2.8.1
2016-02-28 Yixuan Qiu <[email protected]>
* inst/include/Eigen/src/SparseCore/CompressedStorage.h,
inst/include/Eigen/src/SparseCore/SparseBlock.h,
inst/include/Eigen/src/SparseCore/SparseMatrix.h,
inst/include/Eigen/src/SparseCore/SparseRedux.h,
inst/include/Eigen/src/SparseCore/SparseVector.h:
Another patch from upstream to fix UBSAN null pointer errors
2016-02-23 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION (Version): Release 0.3.2.8.0
* DESCRIPTION (Author): Added Yixuan Qiu
* inst/NEWS.Rd: Release 0.3.2.8.0
2016-02-22 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.8 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/include/Eigen/src/SparseCore/CompressedStorage.h,
inst/include/Eigen/src/Core/util/Memory.h: Applied patch from
upstream to fix UBSAN errors
2016-01-20 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Release 0.3.2.7.0
* debian/*: Changes for Debian release of 0.3.2.7.0
2016-01-19 Dirk Eddelbuettel <[email protected]>
* inst/unitTests/runit.sparse.R (test.sparseCholesky.R): Accomodate
stricter as.vector() requirements in R-devel
2016-01-18 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.7 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
2015-11-01 Alexey Stukalov <[email protected]>
* src/fastLm.cpp: Do not include R's LAPACK header if MKL defined
2015-09-23 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Release 0.3.2.5.1
* debian/*: Changes for Debian release of 0.3.2.5.1
2015-09-21 Dirk Eddelbuettel <[email protected]>
* inst/include/Eigen/src/SparseCore/CompressedStorage.h: Added
somewhat adapted code from upstream PR #118 to address UBSAN
2015-08-21 Dirk Eddelbuettel <[email protected]>
* src/RcppEigen.cpp: Updated code to use Rcpp Attributes
* src/fastLm.cpp: Ditto
* src/fastLm.h: Ditto
* R/fastLm.R: Ditto
* inst/unitTests/runit.fastLm.R: Ditto
2015-08-04 Dirk Eddelbuettel <[email protected]>
* R/RcppEigen.package.skeleton.R: Correct kitten() use based on patch
kindly supplied by Grant Brown (cf GitHub issue #21)
2015-07-13 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Version 0.3.2.5.0
2015-07-13 Yixuan Qiu <[email protected]>
* inst/include/Eigen/src/Core/Assign.h: Applied patch from upstream
Eigen that will appear in the next release
2015-07-12 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Added more explicitly quoting per R CMD check
* NAMESPACE: Explicitly importFrom() stats and utils packages
2015-07-11 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.5 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/include/RcppEigenWrap.h: Fixed three incorrect error messages
2015-06-06 Dirk Eddelbuettel <[email protected]>
* R/RcppEigen.package.skeleton.R: Correct use of requireNamespace()
2015-02-26 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Version 0.3.2.4.0
* debian/*: Updated
2015-02-23 Dirk Eddelbuettel <[email protected]>
* inst/include/Eigen: Updated to release 3.2.4 of Eigen
* DESCRIPTION: Updated Version: and Date:
* README.md: Idem
* .travis.yml: Switch to ppa:edd/misc for binaries
* R/RcppEigen.package.skeleton.R: Use pkgKitten::kitten, if installed
* inst/skeleton/rcppeigen_hello_world.Rd: Added new page
* inst/skeleton/Makevars: Minor edits
* inst/skeleton/Makevars.win: Idem
* DESCRIPTION: Added Suggests: for pkgKitten
* .travis.yml: Also install pkgKitten
2014-12-22 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.3 of Eigen
* DESCRIPTION: Idem
* README.md: Idem
2014-11-23 Yixuan Qiu <[email protected]>
* inst/unitTests/runit.wrap.R: Added a number of unit tests
* inst/unitTests/runit.transform.R: Idem
* inst/unitTests/runit.sparse.R: Idem
2014-10-20 Dirk Eddelbuettel <[email protected]>
* inst/examples/lmBenchmark.R: Updated RcppArmadillo .Call in example
2014-08-21 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New version 0.3.2.2.0 which was prepared expertly by
Yixuan Qiu in a nice and clean pull request -- a big thank you for that!
* DESCRIPTION: Adjusting Date: as well
2014-08-19 Yixuan Qiu <[email protected]>
* inst/include/Eigen: Updated to release 3.2.2 of Eigen
* inst/unitTests/runit.wrap.R: More unit tests to reflect changes in
as() exporters
2014-05-29 Yixuan Qiu <[email protected]>
* inst/include/RcppEigenWrap.h: Added as() conversion from R vector to
Eigen::Array<T, 1, Eigen::Dynamic>
* inst/include/RcppEigenWrap.h: Fixed incorrect as() exporters
* inst/include/RcppEigenWrap.h: Check matrix type of "dgCMatrix"
instead of "CsparseMatrix"
* inst/include/RcppEigenWrap.h, inst/include/RcppEigenForward.h:
Added as() conversion from "dgRMatrix" to
Eigen::MappedSparseMatrix<T, Eigen::RowMajor>
2014-05-01 Dirk Eddelbuettel <[email protected]>
* inst/include/Eigen/src/Core/util/Memory.h: Applied patch by Gael
Guennebaud created in response to Doug's bug report (#803) which in
turn is based on the UBSAN report at CRAN by Brian Ripley
2014-03-06 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New version 0.3.2.1.1
2014-03-05 Dirk Eddelbuettel <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h:
Better, more general test for DIRENT feature thanks to Brian Ripley
2014-03-04 Dirk Eddelbuettel <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h:
(re-)add another #ifndef excluding a line on Solaris
2014-03-03 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New release version 0.3.2.1.0
2014-03-03 Douglas Bates <[email protected]>
* inst/include/Eigen: Update to release 3.2.1 of Eigen
2014-03-01 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New minor version 3.2.0.3
* DESCRIPTION: Switched to 'Imports: Rcpp (>= 0.11.0)'
* src/Makevars: Updated for Rcpp 0.11.0
* src/Makevars.win: Ditto
* R/RcppEigen.package.skeleton.R: Updated for Rcpp 0.11.0, also
updated for current R versions by removing deprecated 'namespace' arg
* man/RcppEigen.package.skeleton.Rd: Removed 'namespace' for current R
* inst/skeleton/rcppeigen_hello_world.cpp: Rewritten / extended
similar to the RcppArmadillo variant; now contains four functions
exported by Rcpp Attributes
* inst/skeleton/Makevars: Updated for Rcpp 0.11.0, also noted C++11 option
via setting of 'USE_CXX1X=' with R 3.1.0 or later
* inst/skeleton/Makevars.win: Ditto
2014-01-26 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New minor version 3.2.0.2
2014-01-22 Dirk Eddelbuettel <[email protected]>
* NAMESPACE: Added importFrom(Rcpp, evalCpp) needed for next Rcpp
2014-01-12 Dirk Eddelbuettel <[email protected]>
* R/SHLIB.maker: Commented-out, file to be removed
2013-12-19 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: Updated Description to mention MPL-2 license for Eigen
* inst/unitTests/runit.solutions.R: RUnit file converted from testthat
* inst/unitTests/runit.transform.R: Idem
* inst/unitTests/runit.wrap.R: Idem
* DESCRIPTION: Remove Suggests: of testthat
2013-12-18 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New minor version 3.2.0.1
* DESCRIPTION: New maintainer
* DESCRIPTION: Added Copyright: reference to new COPYRIGHTS file
* DESCRIPTION: Added reference to new LICENSE file
* inst/COPYRIGHTS: Added, based on existing debian/copyright file
* LICENSE: Added to state MPL-2 for Eigen, GPL (>=2) for RcppEigen
* inst/include/Eigen/src/SparseLU/SparseLU.h: Applied Solaris patch
* inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h:
Idem
* inst/include/RcppEigenForward.h: Idem
2013-12-04 Dirk Eddelbuettel <[email protected]>
* debian/*: Added after emails with Doug
* .Rbuildignore: Added debian/
2013-11-13 Douglas Bates <[email protected]>
* DESCRIPTION: New version, release date and dependencies
* inst/include/Eigen: Update to release 3.2.0 of Eigen
2013-02-03 Dirk Eddelbuettel <[email protected]>
* DESCRIPTION: New minor version 0.3.1.2.1 for upload to CRAN and JSS
* NEWS.org: Updated
2013-01-26 Dirk Eddelbuettel <[email protected]>
* vignettes/jss835/: Regroup all related files in this directory
* .Rbuildignore: Ignore vignettes/jss835
2013-01-14 Dirk Eddelbuettel <[email protected]>
* inst/CITATION: Added as provided by JSS editor
* man/fastLm.Rd: Added reference to JSS paper
* man/RcppEigen-package.Rd: Idem
2012-11-29 Douglas Bates <[email protected]>
* DESCRIPTION: New version
* inst/include/Eigen, inst/include/unsupported: Update to version
3.1.2 of Eigen.
2012-11-29 Romain Francois <[email protected]>
* include/RcppEigenWrap.h: compatibility issue with Rcpp 0.10.1
2012-08-14 Dirk Eddelbuettel <[email protected]>
* R/flags.R: Add two (unexported) functions CxxFlags() and
RcppEigenCxxFlags() for use in Makefiles etc
2012-07-30 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h, inst/unitTests/runit.RcppEigen.R:
Another suggestion from Gael Guennebaud to allow row vectors to be
wrapped.
2012-07-28 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h, inst/unitTests/runit.RcppEigen.R: More
fixes to RcppEigenWrap.h and adjustment of tests accordingly.
The changes allow RowMajor matrices to be wrapped (thanks to Gael
Guennebaud) but cannot handle RowVector types. There will need to be
more template metaprogramming done to redirect the case of RowVector,
which cannot be changed to a ColMajor form.
* src/Makevars: Because of changes in R, -DNDEBUG is automatic.
One must override it with -UNDEBUG in the local ~/.R/Makevars to
activate the debugging code.
* inst/doc/code.R: New version of wrap code provides correct answer to
the badtrans example
* DESCRIPTION: Bump the date.
2012-07-27 Douglas Bates <[email protected]>
* inst/include/Eigen/*: Changed to released version of Eigen-3.1.0
using the MPL2 license.
2012-07-19 Dirk Eddelbuettel <[email protected]>
* R/fastLm.R: correct residual standard error display
* R/fastLm.R: improved test for intercept once more with a tip of the
hat to Doug
2012-07-17 Dirk Eddelbuettel <[email protected]>
* R/fastLm.R: Corrections for R^2 in no-intercept case
2012-06-26 Douglas Bates <[email protected]>
* DESCRIPTION, R/unit.test.R, inst/include/Eigen/*: Massive
changes related to upgrade to Eigen-3.1.0
2012-03-13 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h: Change the wrap methods to avoid
creating Rcpp::Dimension objects (which are implicitly created by the
Rcpp::Matrix constructor).
* inst/tests/test-solutions.R: Clean up. I defined the results then
reevaluated them.
2012-03-08 Douglas Bates <[email protected]>
* inst/include/RcppEigenForward.h: Remove an include of
RcppEigenConfig.h which is no longer needed.
* ChangeLog, NEWS, NEWS.org: Update Changelog and NEWS which is
generated from an org-mode file NEWS.org
* inst/include/RcppEigenConfig.h,
inst/include/unsupported/Eigen/MoreVectorization,
inst/include/unsupported/Eigen/src/MoreVectorization/CMakeLists.txt:
Delete the unsupported/Eigen/src/MoreVectorization module which we
don't need
* inst/include/unsupported/Eigen/src/MoreVectorization/MathFunctions.h:
Delete the unsupported/Eigen/src/MoreVectorization module which we
don't need
* inst/tests/test-solutions.R, inst/tests/test-transform.R,
inst/tests/test-wrap.R: Add testthat test files, temporarily disabled
for R CMD check because of an unknown conflict
* DESCRIPTION, R/unit.test.R, inst/include/Eigen/Cholesky,
..., src/Makevars: Massive changes in upgrade to Eigen-3.1.0-alpha2
2012-03-03 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h: Correct a typo.
2012-02-28 Douglas Bates <[email protected]>
* inst/include/RcppEigenForward.h, inst/include/RcppEigenWrap.h: Add as
templates for ArrayXd and ArrayXXd
2012-02-03 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h, inst/unitTests/runit.sparse.R: Allow
import of compressed row sparse matrices. Add test of same.
2012-01-18 Douglas Bates <[email protected]>
* inst/include/RcppEigenWrap.h: Allow for wrapping sparse row-major
matrices.
2011-12-31 Douglas Bates <[email protected]>
* inst/include/RcppEigenCholmod.h: Minor typo in a comment
2011-12-23 Dirk Eddelbuettel <[email protected]>
* inst/unitTests/runTests.R: unit tests output 'fallback' directory
changed to '..' and files are now in top-level of $pkg.Rcheck/
2011-11-14 Douglas Bates <[email protected]>
* vignettes/RcppEigen-intro-nojss.Rnw: Many, many changes by Dirk
and by Doug over the last two weeks to create a JSS paper and
updated package. Too many changes to list.
2011-10-26 Douglas Bates <[email protected]>
* inst/doc/Rcpp.bib, inst/doc/RcppEigen-Intro.Rnw,
inst/doc/RcppEigen-Intro.pdf: Add an introductory vignette.
* src/fastLm.cpp, src/fastLm.h: Use a method for XtX but returning a
MatrixXd, not a view.
* inst/doc/RcppEigen-Intro.Rnw: Describe the SymmEig method correctly.
* src/fastLm.cpp, src/fastLm.h: Use a macro for XtX temporarily. Clean
up code.
* inst/include/RcppEigenCholmod.h, inst/include/RcppEigenStubs.h: Update
to Matrix_1.0.2 versions
* inst/include/Eigen, inst/include/unsupported: update to eigen 3.0.3
* src/RcppEigen.cpp: Add externally callable functions for Eigen version
and SSE instruction sets in use.
* inst/examples/lmBenchmark.R: Suppress messages and provide additional
information about Eigen version and SSE instructions in use.
* R/fastLm.R: Allow optional arguments to be passed to printCoefmat;
adapt to new returned structure.
2011-09-16 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h: Avoid
compiler warnings about comparing signed and unsigned values.
2011-09-13 Douglas Bates <[email protected]>
* src/Makevars: Force the -DNDEBUG flag to satisfy R CMD check in
R-2.14.0 and higher
2011-09-12 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h:
Remove the solvetype specification for the solve method (but type is
retained for solveInPlace).
2011-09-11 Douglas Bates <[email protected]>
* inst/include/RcppEigenForward.h: Remove forward declaration of
non-existent templated function.
2011-09-02 Douglas Bates <[email protected]>
* DESCRIPTION, inst/include/Eigen/src/Core/util/Meta.h: New release.
ifdef the use of "long long" using RCPP_HAS_LONG_LONG_TYPES (thanks,
Dirk)
2011-08-31 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h:
Delete my addition of a CholmodAutoLLt mode, which is not needed (I
misunderstood something previously).
2011-08-28 Douglas Bates <[email protected]>
* many files in inst/include/Eigen and inst/include/unsupported:
Upgrade to Eigen release 3.0.2
2011-08-12 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h:
By-passing the const reference
2011-08-11 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h: Add a
solveInPlace method to try to avoid memory problems.
2011-08-10 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h:
Attempted fix of problem of freeing Map'ed memory in the Cholmod
solve.
2011-07-31 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h:
Trying to fix the memory problems from the CholmodDecomposition solve
methods - apparently unsuccessfully.
2011-07-29 Douglas Bates <[email protected]>
* inst/include/unsupported/Eigen/src/SparseExtra/CholmodSupport.h: Add
LLtAuto method (which doesn't seem to work), more extractors and a