context.xml.example

<?xml version="1.0" encoding="UTF-8"?>

<!-- This is an example of META-INF/context.xml - a Tomcat-specific shorthand to specify JNDI resources during development. 
     See http://tomcat.apache.org/tomcat-5.5-doc/jndi-datasource-examples-howto.html
 -->

<!-- Copy this file (context.xml.example) to context.xml and replace YOUR-XXX strings with suitable values. 
     (Note that context.xml is set to be ignored by git, so placing passwords there is safe.)  
     Make sure that /usr/share/tomcat7/lib contains a postgres JDBC driver jar. 
     Now, dropping treebase-web.war to $CATALINA_HOME/webapps of a vanilla Tomcat should automatically create 
     config file $CATALINA_HOME/conf/Catalina/localhost/treebase-web.xml, 
     which instructs Tomcat to provide a JNDI DataSource. 
     FYI: If this config is created or modified by hand, it is not affected by WAR (re-)deployments. 
          (I.e., server-side configuration supercedes WAR-side.)  
-->

<Context reloadable="true">

  <Resource name="jdbc/TreebaseDB" auth="Container"
            type="javax.sql.DataSource" 
            description="The JNDI DataSource for the Treebase postgres instance."
            driverClassName="org.postgresql.Driver" 
            url="jdbc:postgresql://YOUR-URL"
            username="YOUR-NAME" password="YOUR-PASS"
			maxActive="20" maxIdle="10" maxWait="-1"
            />
            
  <Environment name="tb2/MesquiteFolder" value="/PATH/TO/YOUR/mesquite-2.01.tb"
         type="java.lang.String" override="false"
	     description="Absolute path to the directory where headless Mesquite is unpacked on the host system."/>	
	
  <Environment name="tb2/SiteUrl" value="http://YOUR-HOST/treebase-web/"
         type="java.lang.String" override="false"
	description="The base URL from which this Treebase instance is served."/>	

  <Environment name="tb2/PurlBase" value="http://purl.org/YOUR/PURL/DOMAIN/phylows/"
         type="java.lang.String" override="false"
	description="The base URL of a PURL service that redirects to this Treebase instance."/>	

  <Environment name="tb2/SmtpHost" value="smtp.YOUR.SERVER.ORG"
         type="java.lang.String" override="false"
	description="Host name of an SMTP server that your instance can use without authentication."/>	

</Context>