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335 Open 1,754 Closed
335 Open 1,754 Closed
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Issues list

Ensure validation is not called multiple times on same landing zone app: landingzones Issue in the landingzones app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#2153 opened May 7, 2025 by mikkonie v1.1.0
@mikkonie
Incorrect user in landing zone move cache update timeline event app: landingzones Issue in the landingzones app app: samplesheets Issue in the samplesheets app bug Something isn't working low priority A decidedly low priority issue
#2152 opened May 7, 2025 by mikkonie v1.1.0
@mikkonie
Add per-project limit on landing zone validate-only jobs app: landingzones Issue in the landingzones app feature Requested feature or enhancement
#2150 opened May 6, 2025 by mikkonie
8 tasks
v1.1.0
@mikkonie
Add support for SHA256 checksums app: irodsbackend Issue in the irodsbackend app app: landingzones Issue in the landingzones app app: taskflowbackend Issue in the taskflowbackend app breaking Breaking change, to be implemented and documented with care feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2149 opened May 6, 2025 by mikkonie
Refactor samplesheets IrodsObjectListAjaxView app: irodsbackend Issue in the irodsbackend app app: samplesheets Issue in the samplesheets app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#2145 opened Apr 30, 2025 by mikkonie v1.2.0
Maligned tooz lock ID generation in ProjectLockAPI app: taskflowbackend Issue in the taskflowbackend app bug Something isn't working environment Issues of dependencies, CI, deployment etc.
#2144 opened Apr 29, 2025 by mikkonie
@mikkonie
1
Implement parallel iRODS checksum computing for landing zone validation app: taskflowbackend Issue in the taskflowbackend app environment Issues of dependencies, CI, deployment etc. feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2142 opened Apr 24, 2025 by mikkonie
Celeryd running taskflow enters state where it is unable to retrieve lock coordinator app: taskflowbackend Issue in the taskflowbackend app bug Something isn't working environment Issues of dependencies, CI, deployment etc. ongoing Ongoing issue, needs observation or pending on other projects
#2137 opened Apr 14, 2025 by mikkonie
@mikkonie
Refactor project lock checking logic app: landingzones Issue in the landingzones app app: samplesheets Issue in the samplesheets app app: taskflowbackend Issue in the taskflowbackend app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#2136 opened Apr 14, 2025 by mikkonie v1.2.0
Preserve existing database objects on sheet replace? app: samplesheets Issue in the samplesheets app future Ideas for the future, not in current milestones internal Changes invisible to the user or APIs (e.g. refactoring and optimization) tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2135 opened Apr 14, 2025 by mikkonie
Add iRODS access ticket updating to project modify API sync app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#2133 opened Apr 11, 2025 by mikkonie
5 tasks
v1.2.0
Add file count limit to landing zones app: landingzones Issue in the landingzones app app: taskflowbackend Issue in the taskflowbackend app feature Requested feature or enhancement future Ideas for the future, not in current milestones tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2125 opened Apr 7, 2025 by mikkonie
Disable iRODS access for deactivated users app: irodsbackend Issue in the irodsbackend app app: taskflowbackend Issue in the taskflowbackend app environment Issues of dependencies, CI, deployment etc. feature Requested feature or enhancement
#2123 opened Apr 7, 2025 by mikkonie
@mikkonie
1
Unintentional splitting/pooling in large ISA-Tab may cause dramatic assay bloat and potential server crash app: samplesheets Issue in the samplesheets app bug Something isn't working
#2119 opened Apr 1, 2025 by mikkonie
@mikkonie
2
Add support for limited guest role app: irodsbackend Issue in the irodsbackend app app: landingzones Issue in the landingzones app app: samplesheets Issue in the samplesheets app app: taskflowbackend Issue in the taskflowbackend app feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2116 opened Mar 31, 2025 by mikkonie
@mikkonie
Remove legacy sample sheet sync feature? app: samplesheets Issue in the samplesheets app breaking Breaking change, to be implemented and documented with care feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#2107 opened Mar 21, 2025 by mikkonie v1.2.0
@mikkonie
Remove legacy ENABLE_IRODS setting and its usage app: irodsbackend Issue in the irodsbackend app app: samplesheets Issue in the samplesheets app breaking Breaking change, to be implemented and documented with care environment Issues of dependencies, CI, deployment etc. feature Requested feature or enhancement
#2100 opened Mar 18, 2025 by mikkonie v1.2.0
Allow more fine grained control of IGV session build-up // Generic Study Plugin app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#2087 opened Mar 6, 2025 by Nicolai-vKuegelgen
1
Restructure settings and permissions for controlling file selection for IGV sessions app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#2086 opened Mar 6, 2025 by Nicolai-vKuegelgen
1
Cleanup and prepare v1.1.0 documentation Improvements or additions to documentation internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#2084 opened Mar 5, 2025 by mikkonie
11 of 32 tasks
v1.1.0
@mikkonie
Build release specific RTD docs, link to current release when not deploying dev branch documentation Improvements or additions to documentation environment Issues of dependencies, CI, deployment etc.
#2076 opened Feb 21, 2025 by mikkonie
@mikkonie
Fail gracefully on IGV attempts to open invalid SODAR URLs app: samplesheets Issue in the samplesheets app environment Issues of dependencies, CI, deployment etc. feature Requested feature or enhancement
#2075 opened Feb 20, 2025 by mikkonie v1.1.0
@mikkonie
2
Review and refactor timeline event handling in samplesheets views app: samplesheets Issue in the samplesheets app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#2072 opened Feb 17, 2025 by mikkonie v1.2.0
Upgrade dependencies for v1.1.0 environment Issues of dependencies, CI, deployment etc.
#2068 opened Feb 13, 2025 by mikkonie
8 tasks done
v1.1.0
@mikkonie
Upgrade supported dev platform and CI image to Ubuntu 22.04 breaking Breaking change, to be implemented and documented with care environment Issues of dependencies, CI, deployment etc.
#2067 opened Feb 12, 2025 by mikkonie
1 of 4 tasks
v1.2.0
@mikkonie
1
ProTip! Adding no:label will show everything without a label.