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added eval script for mitochondria based on tif files (for now) #114

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@lufre1 lufre1 commented Mar 11, 2025

@constantinpape @SarahMuth
i added this eval script for mitochondria and used fidi's script to segment the new tomos with it (with the mitochondria model 1)
the segmentations look pretty bad :( so i tried increasing the tiling...
All results and files can be found here: /scratch-grete/projects/nim00007/data/mitochondria/cooper/20250308_Mito_Seg_Done
Screenshot from 2025-03-11 16-41-02
image

atm I am not quite sure what happened

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lufre1 commented Mar 13, 2025

@constantinpape @SarahMuth i added this eval script for mitochondria and used fidi's script to segment the new tomos with it (with the mitochondria model 1) the segmentations look pretty bad :( so i tried increasing the tiling... All results and files can be found here: /scratch-grete/projects/nim00007/data/mitochondria/cooper/20250308_Mito_Seg_Done Screenshot from 2025-03-11 16-41-02 image

atm I am not quite sure what happened

this should be solved by using the CLI

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