Repositories list

• timsrust

  Public
  Rust

  •

  Apache License 2.0

  •12•0•0•0•Updated Apr 24, 2025Apr 24, 2025

• maccoys

  Public
  Rust

  •

  Other

  •0•0•1•0•Updated Apr 17, 2025Apr 17, 2025

• macpepdb

  Public
  3rd generation of MaCPepDB reimplemented using Rust and based on ScyllaDB

  Rust

  •

  Other

  •0•1•1•0•Updated Apr 17, 2025Apr 17, 2025

• muir

  Public
  Containers for the Medical Bioinformatics

  Dockerfile

  •

  Apache License 2.0

  •0•0•0•0•Updated Apr 16, 2025Apr 16, 2025

• pipeline-of-identification

  Public
  Nextflow

  •0•0•1•1•Updated Apr 16, 2025Apr 16, 2025

• xcorr-reimplementation

  Public
  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Dec 30, 2024Dec 30, 2024

• pia

  Public
  📚 🔬 PIA - Protein Inference Algorithms

  search-engineinferenceprotein+ 3proteomicsprotein-inferencespectrum-identification

  Java

  •

  Other

  •10•22•10•1•Updated Dec 20, 2024Dec 20, 2024

• maccoys-exchange-entities

  Public
  Entities for exchanging MaCcoyS results between web API and a client.

  Rust

  •

  Other

  •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

• maccoys-frontend

  Public
  Web based frontend for submitting MaCcoyS searches and browsing results

  Rust

  •

  Other

  •0•0•0•0•Updated Oct 2, 2024Oct 2, 2024

• MHC2-prediction-workflows

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 9, 2024Jul 9, 2024

• wf-nfcore-rnaseq

  Public
  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Nextflow

  •

  MIT License

  •754•0•0•0•Updated Feb 16, 2024Feb 16, 2024

• macpepdb-frontend-nuxt

  Public
  Frontend for MaCPepDB API

  Vue

  •0•1•0•0•Updated Oct 18, 2023Oct 18, 2023

• pia-knime-nodes

  Public
  This repository holds the declaration for KNIME nodes to use PIA

  workflowknimeprotein+ 2piaknime-node

  Java

  •5•0•1•0•Updated Jul 11, 2023Jul 11, 2023